Category Archives: Uncategorized

这篇小工作介绍了如何引入恰当地度量，客观地评价一个基因集的通路富集。This work introduced proper metric to evaluate the effectiveness of pathway enrichment in terms of an selected gene set. Paper link: https://medinform.jmir.org/2021/6/e28247/PDF Paper ToC figure:

We are happy to have Dr. Pierre Larmande from IRD, France and Dr. Claire Nedellec from INRAE, France virtually visiting us again online in Tencent Meeting. Talks report: http://coi.hzau.edu.cn/info/1023/7838.htm

Congrats to Yufeu et al who won a “Guochuang” funding in the support of their 2.1k rice trait corpus research. “Guochuang”, pinyin of “国创”, is a nation-level research funding for supporting college students’ early science training. Check the link for more detail about their project: https://hzaubionlp.com/gene-to-trait-rice/

Thank Dr. Anastasios Nentidis from, Institute of Informatics and Telecommunications, NCSR Demokritos, for bringing an interesting MeSH semantic indexing talk. Report page: http://coi.hzau.edu.cn/info/1023/7772.htm

Thank Dr. George Paliouras from Institute of Informatics and Telecommunications, NCSR Demokritos for the interesting BioASQ talk. Report page: http://coi.hzau.edu.cn/info/1023/7717.htm

Let us welcome Xingyu Zhou to “upgrade” his lab role as an Research Assistant since today.

We are happy to release a video which introduces AGAC corpus and its application in mutation type discovery. A recent case study in gene-disease association discovery in AD is as well introduced. https://youtu.be/YlzxtMkaYQk Narrator: Yuxing Wang Alternatively, visit the video via this link. To visit the whole AGAC page, please click here.

Here, enrRiceTrait is a new tool for rice trait ontology. To present the enrichment, gene-trait association results are based on text mining and available data bases, while the traits are normalized by RTO 1.0, a newly developed rice trait ontology. https://www.youtube.com/watch?v=Fqjibzn7IxY Narrator: Yun Liu (Video released in Apr, 2021). Alternatively, watch the video here. ToContinueContinue reading “The lab is releasing a new video about enrRiceTrait”

We are happy to have Dr. Anastasia Krithara from National Center for Scientific Research “Demokritos” virtually visited us and give a wonderful online talk, entitled as “iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge”. http://coi.hzau.edu.cn/info/1023/7518.htm